Protein Solubility Calculator

Enter your protein's pI (or paste its sequence), then set your solution pH, salt concentration, and temperature to get a Solubility Score for your protein under those conditions. You'll also see the ΔpH between your solution and the isoelectric point, an Aggregation Risk rating, and the Optimal pH Range to keep your protein happily in solution.

Isoelectric point of the protein

Enter single letter amino acid codes

Results

Solubility Score

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ΔpH (pH - pI)

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Aggregation Risk

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Optimal pH Range

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Solubility Factors

Frequently Asked Questions

What is protein solubility and why is it important?

Protein solubility refers to the ability of a protein to dissolve in aqueous solution. It's crucial for protein purification, storage, and biological activity, as insoluble proteins can aggregate and lose function.

How does pH affect protein solubility?

Protein solubility is typically lowest at its isoelectric point (pI) where net charge is zero. Moving the pH away from the pI increases net charge and usually improves solubility by reducing protein-protein interactions.

What role does salt concentration play in protein solubility?

Salt affects protein solubility through ionic strength effects. Low salt can cause electrostatic repulsion, while high salt can shield charges and promote aggregation. Optimal salt concentrations typically range from 50-300 mM.

How accurate is this solubility prediction?

This calculator provides a heuristic estimate based on established biophysical principles. While useful for initial guidance, actual solubility can vary significantly due to protein-specific factors not captured in simple models.

What additives can improve protein solubility?

Common additives include detergents (reduce hydrophobic interactions), reducing agents (prevent disulfide aggregation), glycerol (stabilizing agent), and various salts and buffers that can optimize solution conditions.

What temperature should I use for protein storage?

Lower temperatures generally improve protein stability and reduce aggregation. Most proteins are stored at 4°C for short-term use, though optimal temperature depends on the specific protein and application.

How do I interpret the aggregation risk assessment?

High aggregation risk indicates conditions favoring protein-protein interactions and precipitation. This typically occurs near the pI, at high concentrations, elevated temperatures, or inappropriate salt conditions.

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